Publications
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2023
- Bassier Zadran B., Praveen Dhondurao Sudhindar, Daniel Wainwright, Yvonne Bury, Saimir Luli, Rachel Howarth, Misti Vanette McCain, Robyn Watson, Hannah Huet, Fanni Palinkas, Rolando Berlinguer-Palmini, John Casement, Derek A. Mann, Fiona Oakley, John Lunec, Helen Reeves, Geoffrey J. Faulkner & Ruchi Shukla. Impact of retrotransposon protein L1 ORF1p expression on oncogenic pathways in hepatocellular carcinoma: the role of cytoplasmic PIN1 upregulation. Br J Cancer. 2023 Mar;128(7):1236-1248. doi: 10.1038/s41416-023-02154-9.
- Valeria Chichagova, Maria Georgiou, Madeleine Carter, Birthe Dorgau, Gerrit Hilgen, Joseph Collin, Rachel Queen, Git Chung, Jila Ajeian, Marina Moya-Molina, Stefan Kustermann, Francois Pognan, Philip Hewitt, Michael Schmitt, Evelyne Sernagor, Lyle Armstrong, Majlinda Lako. Incorporating microglia-like cells in human induced pluripotent stem cell-derived retinal organoids. Journal of Cellular and Molecular Medicine. 2023 Feb; 27(3):435-445. doi.org/10.1111/jcmm.17670
- Jean de Montigny, Evelyne Sernagor and Roman Bauer. Retinal self-organization: a model of retinal ganglion cells and starburst amacrine cells mosaic formation. Open Biology April 2023 doi.org/10.1098/rsob.220217
- Alina Goldberg-Cavalleri, Nawaporn Onkokesung, Sara Franco-Ortega and Robert Edwards. ABC transporters linked to multiple herbicide resistance in blackgrass (Alopecurus myosuroides). Front. Plant Sci., 17 March 2023 Sec. Plant Abiotic Stress, Volume 14 - 2023 doi.org/10.3389/fpls.2023.1082761.
- Olivia A. Lambourne, Shane Bell, Léa P. Wilhelm, Erika B. Yarbrough, Gabriel G. Holly, Oliver M. Russell, Arwa M. Alghamdi, Azeza M. Fdel, Carmine Varricchio, Emma L. Lane, Ian G. Ganley, Arwyn T. Jones, Matthew S. Goldberg, and Youcef Mehellou*. PINK1-Dependent Mitophagy Inhibits Elevated Ubiquitin Phosphorylation Caused by Mitochondrial Damage. J. Med. Chem. 2023, 66, 11, 7645–7656, May 29, 2023 doi.org/10.1021/acs.jmedchem.3c00555.
- Santu Saha, Rachel Howarth, Sweta Sharma-Saha, Charles Kelly. Bioengineering of a tumour-stroma 3D-tumouroid co-culture model of hypopharyngeal cancer. Biol Open (2023) 12 (5): bio059949. doi.org/10.1242/bio.059949.
- Christin A. Albus, Rolando Berlinguer-Palmini, Zofia M. Chrzanowska-Lightowlers & Robert N. Lightowlers. Four-Color STED Super-Resolution RNA Fluorescent In Situ Hybridization and Immunocytochemistry to Visualize Mitochondrial mRNAs in Context with Mitochondrial Ribosomes. Methods in Molecular Biology, vol 2661. Humana, New York, NY. https://doi.org/10.1007/978-1-0716-3171-3_17.
- Parmveer Singh, Nadia A. Lanman, Hannah L. R. Kendall, Laura Wilson, Ryan Long, Omar E. Franco, Adriana Buskin, Colin G. Miles, Simon W. Hayward, Rakesh Heer, Craig N. Robson. Human prostate organoid generation and the identification of prostate development drivers using inductive rodent tissues. Development (2023) 150 (13): dev201328. https://doi.org/10.1242/dev.201328.
- Marcin Kotlarz, Priscila Melo, Ana Marina Ferreira, Piergiorgio Gentile, Kenneth Dalgarno. Cell seeding via bioprinted hydrogels supports cell migration into porous apatite-wollastonite bioceramic scaffolds for bone tissue engineering. Biomater Adv. 2023 Oct:153:213532. doi: 10.1016/j.bioadv.2023.213532. Epub 2023 Jun 21.
- Rodrigo Cerna-Chavez, Agata Rozanska, Giulia Lodovica Poretti, Nissim Benvenisty, Manoj Parulekar, Majlinda Lako. Retinal pigment epithelium exhibits gene expression and phagocytic activity alterations when exposed to retinoblastoma chemotherapeutics. Exp Eye Res. 2023 Aug:233:109542. doi:10.1016/j.exer.2023.109542. Epub 2023 Jun 17.
- Samuel G V Charlton, Amber N Bible, Eleonora Secchi, Jennifer L Morrell-Falvey, Scott T Retterer, Thomas P Curtis, Jinju Chen, Saikat Jana. Microstructural and Rheological Transitions in Bacterial Biofilms. Adv Sci (Weinh). 2023 Sep;10(27):e2207373. doi: 10.1002/advs.202207373. Epub 2023 Jul 31.
- Valeria Di Leo, Conor Lawless, Marie-Pier Roussel, Tiago B Gomes, Gráinne S Gorman, Oliver M Russell, Helen A L Tuppen, Elise Duchesne, Amy E Vincent. Resistance Exercise Training Rescues Mitochondrial Dysfunction in Skeletal Muscle of Patients with Myotonic Dystrophy Type 1. J Neuromuscul Dis. 2023;10(6):1111-1126. doi: 10.3233/JND-230099.
- Chun Chen, David McDonald, Alasdair Blain, Emily Mossman, Kiera Atkin, Michael F Marusich, Roderick Capaldi, Laura Bone, Anna Smith, Andrew Filby, Daniel Erskine, Oliver Russell, Gavin Hudson, Amy E Vincent, Amy K Reeve. Parkinson's disease neurons exhibit alterations in mitochondrial quality control proteins. NPJ Parkinsons Dis. 2023 Aug 8;9(1):120. doi: 10.1038/s41531-023-00564-3.
- Bethany Hunter, Ioana Nicorescu, Emma Foster, David McDonald, Gillian Hulme, Andrew Fuller, Amanda Thomson, Thibaut Goldsborough, Catharien M U Hilkens, Joaquim Majo, Luke Milross, Andrew Fisher, Peter Bankhead, John Wills, Paul Rees, Andrew Filby, George Merces. OPTIMAL: An OPTimized Imaging Mass cytometry AnaLysis framework for benchmarking segmentation and data exploration. Cytometry A. 2023 Sep 26. doi: 10.1002/cyto.a.24803. Online ahead of print.
- Christopher J Derrick, Emmanuelle Szenker-Ravi, Adrian Santos-Ledo, Ahlam Alqahtani, Amirah Yusof, Lorraine Eley, Alistair H L Coleman, Sumanty Tohari, Alvin Yu-Jin Ng, Byrappa Venkatesh, Essa Alharby, Luke Mansard, Marie-Noelle Bonnet-Dupeyron, Anne-Francoise Roux, Christel Vaché, Joëlle Roume, Patrice Bouvagnet, Naif A M Almontashiri, Deborah J Henderson, Bruno Reversade, Bill Chaudhry. Functional analysis of germline VANGL2 variants using rescue assays of vangl2 knockout zebrafish. Hum Mol Genet. 2023 Oct 10:ddad171. doi: 10.1093/hmg/ddad171. Online ahead of print.
- Livia Delpiano, Lisa W Rodenburg, Matthew Burke, Glyn Nelson, Gimano D Amatngalim, Jeffrey M Beekman, Michael A Gray. Dynamic regulation of airway surface liquid pH by TMEM16A and SLC26A4 in cystic fibrosis nasal epithelia with rare mutations. Proc Natl Acad Sci U S A. 2023 Nov 21;120(47):e2307551120. doi: 10.1073/pnas.2307551120. Epub 2023 Nov 15.
- Lucy M V Gee, Ben Barron-Millar, Jack Leslie, Claire Richardson, Marco Y W Zaki, Saimir Luli, Rachel A Burgoyne, Rainie I T Cameron, Graham R Smith, John G Brain, Barbara Innes, Laura Jopson, Jessica K Dyson, Katherine R C McKay, Alexandros Pechlivanis, Elaine Holmes, Rolando Berlinguer-Palmini, Stella Victorell, George F Mells, Richard N Sandford, Jeremy Palmer, John A Kirby, Christos Kiourtis, Joao Mokochinski, Zoe Hall, Thomas G Bird, Lee A Borthwick, Christopher M Morris, Peter S Hanson, Diana Jurk, Elizabeth A Stoll, Fiona E N LeBeau, David E J Jones, Fiona Oakley. Anti-Cholestatic Therapy with Obeticholic Acid Improves Short-Term Memory in Bile Duct-Ligated Mice. Am J Pathol. 2023 Jan;193(1):11-26. doi: 10.1016/j.ajpath.2022.09.005. Epub 2022 Oct 13.
- Gee LMV, Barron-Millar B, Leslie J, Richardson C, Zaki MYW, Luli S, Burgoyne RA, Cameron RIT, Smith GR, Brain JG, Innes B, Jopson L, Dyson JK, McKay KRC, Pechlivanis A, Holmes E, Berlinguer-Palmini R, Victorelli S, Mells GF, Sandford RN, Palmer J, Kirby JA, Kiourtis C, Mokochinski J, Hall Z, Bird TG, Borthwick LA, Morris CM, Hanson PS, Jurk D, Stoll EA, LeBeau FEN, Jones DEJ, Oakley F. Anti-Cholestatic Therapy with Obeticholic Acid Improves Short-Term Memory in Bile Duct-Ligated Mice. Am J Pathol. 2023 Jan;193(1):11-26. doi: 10.1016/j.ajpath.2022.09.005. Epub 2022 Oct 13.PMID: 36243043
- Faye McLeod, Anna Dimtsi, Amy C Marshall, David Lewis-Smith, Rhys Thomas, Gavin J Clowry, Andrew J Trevelyan. Altered synaptic connectivity in an in vitro human model of STXBP1 encephalopathy. Brain. 2023 Mar 1;146(3):850-857. doi: 10.1093/brain/awac396. PMID: 36315647 PMCID: PMC9976961
- Tetsushi Kataura, Elsje G Otten, Yoana Rabanal-Ruiz, Elias Adriaenssens, Francesca Urselli, Filippo Scialo, Lanyu Fan, Graham R Smith, William M Dawson, Xingxiang Chen, Wyatt W Yue, Agnieszka K Bronowska, Bernadette Carroll, Sascha Martens, Michael Lazarou, Viktor I Korolchuk. NDP52 acts as a redox sensor in PINK1/Parkin-mediated mitophagy. EMBO J. 2023 Mar 1;42(5):e111372. doi: 10.15252/embj.2022111372. Epub 2022 Dec 14.
- B Zaaimi, M Turnbull, A Hazra, Y Wang, C Gandara, F McLeod, E E McDermott, E Escobedo-Cousin, A Shah Idil, R G Bailey, S Tardio, A Patel, N Ponon, J Gausden, D Walsh, F Hutchings, M Kaiser, M O Cunningham, G J Clowry, F E N LeBeau, T G Constandinou, S N Baker, N Donaldson, P Degenaar, A O'Neill, A J Trevelyan, A Jackson. Closed-loop optogenetic control of the dynamics of neural activity in non-human primates. Nat Biomed Eng. 2023 Apr;7(4):559-575. doi: 10.1038/s41551-022-00945-8. Epub 2022 Oct 20.
- Mihael Vucur, Ahmed Ghallab, Anne T Schneider, Arlind Adili, Mingbo Chen, Mirco Castoldi, Michael T Singer, Veronika Büttner, Leonie S Keysberg, Lena Küsgens, Marlene Kohlhepp, Boris Görg, Suchira Gallage, Jose Efren Barragan Avila, Kristian Unger, Claus Kordes, Anne-Laure Leblond, Wiebke Albrecht, Sven H Loosen, Carolin Lohr et al. Sublethal necroptosis signaling promotes inflammation and liver cancer. Immunity. 2023 Jul 11;56(7):1578-1595.e8. doi: 10.1016/j.immuni.2023.05.017. Epub 2023 Jun 16.
- Elizaveta A Olkhova, Carla Bradshaw, Alasdair Blain, Debora Alvim, Doug M Turnbull, Fiona E N LeBeau, Yi Shiau Ng, Gráinne S Gorman, Nichola Z Lax. A novel mouse model of mitochondrial disease exhibits juvenile-onset severe neurological impairment due to parvalbumin cell mitochondrial dysfunction. Commun Biol. 2023 Oct 23;6(1):1078. doi: 10.1038/s42003-023-05238-7.
- Enrico Pracucci, Robert T Graham, Laura Alberio, Gabriele Nardi , Olga Cozzolino, Vinoshene Pillai, Giacomo Pasquini, Luciano Saieva, Darren Walsh, Silvia Landi, Jinwei Zhang, Andrew J Trevelyan, Gian-Michele Ratto. Daily rhythm in cortical chloride homeostasis underpins functional changes in visual cortex excitability. Nat Commun. 2023 Nov 4;14(1):7108. doi: 10.1038/s41467-023-42711-7.
- Rachel Queen, Moira Crosier, Lorraine Eley, Janet Kerwin, Jasmin E Turner, Jianshi Yu, Ahlam Alqahtani, Tamilvendhan Dhanaseelan, Lynne Overman, Hannah Soetjoadi, Richard Baldock, Jonathan Coxhead, Veronika Boczonadi, Alex Laude, Simon J Cockell, Maureen A Kane, Steven Lisgo, Deborah J Henderson. Spatial transcriptomics reveals novel genes during the remodelling of the embryonic human arterial valves. PLoS Genet. 2023 Nov 27;19(11):e1010777. doi:10.1371/journal.pgen.1010777. eCollection 2023 Nov.
- Oliver Podmanicky, Fei Gao, Benjamin Munro, Matthew J Jennings, Veronika Boczonadi, Denisa Hathazi, Juliane S Mueller, Rita Horvath. Mitochondrial aminoacyl-tRNA synthetases trigger unique compensatory mechanisms in neurons. Hum Mol Genet. 2023 Nov 17:ddad196. doi: 10.1093/hmg/ddad196.
2022
- McLeod F, Dimtsi A, Marshall AC, Lewis-Smith D, Thomas R, Clowry GJ, Trevelyan AJ. Altered synaptic connectivity in an in vitro human model of STXBP1 encephalopathy. Brain. 2022 Oct 31:awac396. doi: 10.1093/brain/awac396. Online ahead of print. PMID: 36315647
- Scalzone A, Cerqueni G, Wang XN, Ferreira-Duarte A, Dalgarno K, Mattioli-Belmonte M, Gentile P. An In Vitro Engineered Osteochondral Model as Tool to Study Osteoarthritis Environment. Adv Healthc Mater. 2022 Oct 27:e2202030. doi: 10.1002/adhm.202202030. Online ahead of publication.
- Smith LA, Erskine D, Blain A, Taylor RW, McFarland R, Lax NZ. Delineating selective vulnerability of inhibitory interneurons in Alpers' syndrome. Neuropathol Appl Neurobiol. 2022 Oct;48(6):e12833. doi: 10.1111/nan.12833. Epub 2022 Jul 19.PMID: 35790454
- Saha S, Rundle S, Kotsopoulos IC, Begbie J, Howarth R, Pappworth IY, Mukhopadhyay A, Kucukmetin A, Marchbank KJ, Curtin N. Determining the Potential of DNA Damage Response (DDR) Inhibitors in Cervical Cancer Therapy. Cancers (Basel). 2022 Sep 1;14(17):4288. doi: 10.3390/cancers14174288.PMID: 36077823
- Jackson RM, Hatton CF, Spegarova JS, Georgiou M, Collin J, Stephenson E, Verdon B, Haq IJ, Hussain R, Coxhead JM, Mudhar HS, Wagner B, Hasoon M, Davey T, Rooney P, Khan CMA, Ward C, Brodlie M, Haniffa M, Hambleton S, Armstrong L, Figueiredo F, Queen R, Duncan CJA, Lako M. Conjunctival epithelial cells resist productive SARS-CoV-2 infection. Stem Cell Reports. 2022 Jul 12;17(7):1699-1713. doi: 10.1016/j.stemcr.2022.05.017. Epub 2022 Jun 23.PMID: 35750043.
- Cartwright TN, Harris RJ, Meyer SK, Mon AM, Watson NA, Tan C, Marcelot A, Wang F, Zinn-Justin S, Traktman P, Higgins JMG. Dissecting the roles of Haspin and VRK1 in histone H3 phosphorylation during mitosis. Sci Rep. 2022 Jul 1;12(1):11210. doi: 10.1038/s41598-022-15339- 8.PMID: 35778595.
- Yu X, Arden C, Berlinguer-Palmini R, Chen C, Bradshaw C, Smith AL, Whitehall J, White M, Anderson S, Kattner N, Shaw J, Turnbull D, Greaves LC, Walker M. Mitochondrial complex I subunit deficiency promotes pancreatic α-cell proliferation. Mol Metab. 2022 Jun;60:101489. doi: 10.1016/j.molmet.2022.101489. Epub 2022 Apr 4.PMID: 35390502
- Kotlarz M, Ferreira AM, Gentile P, Dalgarno K. Bioprinting of Cell-Laden Hydrogels onto Titanium Alloy Surfaces to Produce a Bioactive Interface. Macromol Biosci. 2022 Jun;22(6):e2200071. doi: 10.1002/mabi.202200071. Epub 2022 Apr 11.PMID: 35365963
- Hatton C, Ghanem SS, Koss DJ, Abdi IY, Gibbons E, Guerreiro R, Bras J; International DLB Genetics Consortium, Walker L, Gelpi E, Heywood W, Outeiro TF, Attems J, McFarland R, Forsyth R, El-Agnaf OM, Erskine D. Prion-like α-synuclein pathology in the brain of infants with Krabbe disease. Brain. 2022 May 24;145(4):1257-1263. doi: 10.1093/brain/awac002.PMID: 34999780
- Scalzone A, Cerqueni G, Bonifacio MA, Pistillo M, Cometa S, Belmonte MM, Wang XN, Dalgarno K, Ferreira AM, De Giglio E, Gentile P. Valuable effect of Manuka Honey in increasing the printability and chondrogenic potential of a naturally derived bioink. Mater Today Bio. 2022 May 13;14:100287. doi: 10.1016/j.mtbio.2022.100287. eCollection 2022 Mar.PMID: 35647514
- Derrick CJ, Santos-Ledo A, Eley L, Paramita IA, Henderson DJ, Chaudhry B. Sequential action of JNK genes establishes the embryonic left-right axis. Development. 2022 May 1;149(9):dev200136. doi: 10.1242/dev.200136. Epub 2022 May 3.PMID: 35352808
- Hipps D, Dobson PF, Warren C, McDonald D, Fuller A, Filby A, Bulmer D, Laude A, Russell O, Deehan DJ, Turnbull DM, Lawless C. Detecting respiratory chain defects in osteoblasts from osteoarthritic patients using imaging mass cytometry. Bone. 2022 May;158:116371. doi: 10.1016/j.bone.2022.116371. Epub
- Govaere O, Petersen SK, Martinez-Lopez N, Wouters J, Van Haele M, Mancina RM, Jamialahmadi O, Bilkei-Gorzo O, Lassen PB, Darlay R, Peltier J, Palmer JM, Younes R, Tiniakos D, Aithal GP, Allison M, Vacca M, Göransson M, Berlinguer-Palmini R, Clark JE, Drinnan MJ, Yki-Järvinen H, Dufour JF, Ekstedt M, Francque S, Petta S, Bugianesi E, Schattenberg JM, Day CP, Cordell HJ, Topal B, Clément K, Romeo S, Ratziu V, Roskams T, Daly AK, Anstee QM, Trost M, Härtlova A. Macrophage scavenger receptor 1 mediates lipid-induced inflammation in non-alcoholic fatty liver disease. J Hepatol. 2022 May;76(5):1001-1012. doi: 10.1016/j.jhep.2021.12.012. Epub 2021 Dec 21.PMID: 34942286
- Rozanska A, Cerna-Chavez R, Queen R, Collin J, Zerti D, Dorgau B, Beh CS, Davey T, Coxhead J, Hussain R, Al-Aama J, Steel DH, Benvenisty N, Armstrong L, Parulekar M, Lako M. pRB-Depleted Pluripotent Stem Cell Retinal Organoids Recapitulate Cell State Transitions of Retinoblastoma Development and Suggest an Important Role for pRB in Retinal Cell Differentiation. Stem Cells Transl Med. 2022 Apr 29;11(4):415-433. doi: 10.1093/stcltm/szac008.PMID: 35325233
- Sachdeva A, Hart CA, Carey CD, Vincent AE, Greaves LC, Heer R, Oliveira P, Brown MD, Clarke NW, Turnbull DM. Automated quantitative high-throughput multiplex immunofluorescence pipeline to evaluate OXPHOS defects in formalin-fixed human prostate tissue. Sci Rep. 2022 Apr 22;12(1):6660. doi: 10.1038/s41598-022-10588-z.PMID: 35459777
- Zummo FP, Krishnanda SI, Georgiou M, O'Harte FP, Parthsarathy V, Cullen KS, Honkanen-Scott M, Shaw JA, Lovat PE, Arden C. Exendin-4 stimulates autophagy in pancreatic β-cells via the RAPGEF/EPAC-Ca2+-PPP3/calcineurin-TFEB axis. Autophagy. 2022 Apr;18(4):799-815. doi: 10.1080/15548627.2021.1956123. Epub 2021 Aug 2. PMID: 34338148
- Dorgau B, Georgiou M, Chaudhary A, Moya-Molina M, Collin J, Queen R, Hilgen G, Davey T, Hewitt P, Schmitt M, Kustermann S, Pognan F, Steel DH, Sernagor E, Armstrong L, Lako M. Human Retinal Organoids Provide a Suitable Tool for Toxicological Investigations: A Comprehensive Validation Using Drugs and Compounds Affecting the Retina. Stem Cells Transl Med. 2022 Mar 17;11(2):159-177. doi: 10.1093/stcltm/szab010.PMID: 35298655.
- Georgiou M, Yang C, Atkinson R, Pan KT, Buskin A, Molina MM, Collin J, Al-Aama J, Goertler F, Ludwig SEJ, Davey T, Lührmann R, Nagaraja-Grellscheid S, Johnson CA, Ali R, Armstrong L, Korolchuk V, Urlaub H, Mozaffari-Jovin S, Lako M. Activation of autophagy reverses progressive and deleterious protein aggregation in PRPF31 patient-induced pluripotent stem cell-derived retinal pigment epithelium cells. Clin Transl Med. 2022 Mar;12(3):e759. doi: 10.1002/ctm2.759.PMID: 35297555.
- Hilgen G, Kartsaki E, Kartysh V, Cessac B, Sernagor E. A novel approach to the functional classification of retinal ganglion cells. Open Biol. 2022 Mar;12(3):210367. doi: 10.1098/rsob.210367. Epub 2022 Mar 9.PMID: 35259949.
- Gillani SQ, Reshi I, Nabi N, Un Nisa M, Sarwar Z, Bhat S, Roberts TM, Higgins JMG, Andrabi S. PCTAIRE1 promotes mitotic progression and resistance against antimitotic and apoptotic signals. J Cell Sci. 2022 Feb 1;135(3):jcs258831. doi: 10.1242/jcs.258831. Epub 2022 Feb 9.PMID: 35044463.
- Luo M, Yang W, Cartwright TN, Higgins JMG, Chen J. Simultaneous Measurement of Single-Cell Mechanics and Cell-to-Materials Adhesion Using Fluidic Force Microscopy. Langmuir. 2022 Jan 18;38(2):620-628. doi: 10.1021/acs. langmuir.1c01973. Epub 2022 Jan 4. PMID: 34981921
- Gee LMV, Barron-Millar B, Leslie J, Richardson C, Zaki MYW, Luli S, Burgoyne RA, Cameron RIT, Smith GR, Brain JG, Innes B, Jopson L, Dyson JK, McKay KRC, Pechlivanis A, Holmes E, Berlinguer-Palmini R, Victorelli S, Mells GF, Sandford RN, Palmer J, Kirby JA, Kiourtis C, Mokochinski J, Hall Z, Bird TG, Borthwick LA, Morris CM, Hanson PS, Jurk D, Stoll EA, LeBeau FEN, Jones DEJ, Oakley F. Anti-Cholestatic Therapy with Obeticholic Acid Improves Short-Term Memory in Bile Duct Ligated Mice. Am J Pathol. 2022 Oct 13:S0002-9440(22)00312-1. doi: 10.1016/j.ajpath.2022.09.005. Online ahead of print.PMID: 36243043
- Zaaimi B, Turnbull M, Hazra A, Wang Y, Gandara C, McLeod F, McDermott EE, Escobedo-Cousin E, Idil AS, Bailey RG, Tardio S, Patel A, Ponon N, Gausden J, Walsh D, Hutchings F, Kaiser M, Cunningham MO, Clowry GJ, LeBeau FEN, Constandinou TG, Baker SN, Donaldson N, Degenaar P, O'Neill A, Trevelyan AJ, Jackson A. Closed-loop optogenetic control of the dynamics of neural activity in non-human primates. Nat Biomed Eng. 2022 Oct 20. doi: 10.1038/s41551-022-00945-8. Online ahead of print.PMID: 36266536
- Hammer M, Huisman M, Rigano A, Boehm U, Chambers JJ, Gaudreault N, North AJ, Pimentel JA, Sudar D, Bajcsy P, Brown CM, Corbett AD, Faklaris O, Lacoste J, Laude A, Nelson G, Nitschke R, Farzam F, Smith CS, Grunwald D, Strambio-De-Castillia C. Author Correction: Towards community-driven metadata standards for light microscopy: tiered specifications extending the OME model. Nat Methods. 2022 Feb;19(2):255. doi: 10.1038/s41592-021-01386-y.PMID: 34980906
- Rigano A, Ehmsen S, Öztürk SU, Ryan J, Balashov A, Hammer M, Kirli K, Boehm U, Brown CM, Bellve K, Chambers JJ, Cosolo A, Coleman RA, Faklaris O, Fogarty KE, Guilbert T, Hamacher AB, Itano MS, Keeley DP, Kunis S, Lacoste J, Laude A, Ma WY, Marcello M, Montero-Llopis P, Nelson G, Nitschke R, Pimentel JA, Weidtkamp-Peters S, Park PJ, Alver BH, Grunwald D, Strambio-De-Castillia C. Author Correction: Micro-Meta App: an interactive tool for collecting microscopy metadata based on community specifications. Nat Methods. 2022 Feb;19(2):256. doi: 10.1038/s41592-021-01388-w.PMID: 34952955
- Rico D, Kent D, Karataraki N, Mikulasova A, Berlinguer-Palmini R, Walker BA, Javierre BM, Russell LJ, Brackley CA. High-resolution simulations of chromatin folding at genomic rearrangements in malignant B cells provide mechanistic insights into proto-oncogene deregulation. Genome Res. 2022 Jul 21;32(7):1355-66. doi: 10.1101/gr.276028.121. Online ahead of print.PMID: 35863900
- Marzena Kurzawa-Akanbi, Phillip Whitfield, Florence Burté, Pietro Maria Bertelli, Varun Pathak, Mary Doherty, Birthe Hilgen, Lina Gliaudelytė, Mark Platt, Rachel Queen, Jonathan Coxhead, Andrew Porter, Maria Öberg, Daniela Fabrikova, Tracey Davey, Chia Shyan Beh, Maria Georgiou, Joseph Collin, Veronika Boczonadi et al. Retinal pigment epithelium extracellular vesicles are potent inducers of age-related macular degeneration disease phenotype in the outer retina. https://doi.org/10.1002/jev2.12295.
- Tetsushi Kataura, Elsje G Otten, Yoana Rabanal‐Ruiz, Elias Adriaenssens, Francesca Urselli, Filippo Scialo, Lanyu Fan, Graham R Smith, William M Dawson, Xingxiang Chen, Wyatt W Yue, Agnieszka K Bronowska, Bernadette Carroll, Sascha Martens, Michael Lazarou and Viktor I Korolchuk. NDP52 acts as a redox sensor in PINK1/Parkin‐mediated mitophagy. The EMBO Journal (2022)42: e111372 https://doi.org/10.15252/embj.2022111372.
2021
- Darin Zerti, Marina Moya Molina, Birthe Dorgau, Sarah Mearns, Roman Bauer, Jumana Al-Aama, Majlinda Lako. IGFBPs mediate IGF-1's functions in retinal lamination and photoreceptor development during pluripotent stem cell differentiation to retinal organoids. Stem Cells. 021 Apr;39(4):458-466. doi: 10.1002/stem.3331. Epub 2021 Jan 14.
- Gary Reynolds, Peter Vegh, James Fletcher, Elizabeth F M Poyner, Emily Stephenson, Issac Goh, Rachel A Botting, Ni Huang, Bayanne Olabi, Anna Dubois, David Dixon, Kile Green, Daniel Maunder, Justin Engelbert, Mirjana Efremova, Krzysztof Polański, Laura Jardine, Claire Jones, Thomas Ness, Dave Horsfall, Jim McGrath, Christopher Carey, Dorin-Mirel Popescu, Simone Webb, Xiao-Nong Wang, Ben Sayer, Jong-Eun Park, Victor A Negri, Daria Belokhvostova, Magnus D Lynch, David McDonald, Andrew Filby, Tzachi Hagai, Kerstin B Meyer, Akhtar Husain, Jonathan Coxhead, Roser Vento-Tormo, Sam Behjati, Steven Lisgo, Alexandra-Chloé Villani, Jaume Bacardit, Philip H Jones, Edel A O'Toole, Graham S Ogg, Neil Rajan, Nick J Reynolds, Sarah A Teichmann, Fiona M Watt, Muzlifah Haniffa. Developmental cell programs are co-opted in inflammatory skin disease. Science. 2021 Jan 22;371(6527):eaba6500. doi: 10.1126/science.aba6500
- Gema Dura, Maria Crespo-Cuadrado, Helen Waller, Daniel T Peters, Ana Marina Ferreira, Jeremy H Lakey, David A Fulton. Hydrogels of engineered bacterial fimbriae can finely tune 2D human cell culture. Biomater Sci. 2021 Apr 7;9(7):2542-2552. doi: 10.1039/d0bm01966f. Epub 2021 Feb 11.
- Rabanal-Ruiz Y, Byron A, Wirth A, Madsen R, Sedlackova L, Hewitt G, Nelson G, Stingele J, Wills JC, Zhang T, Zeug A, Fässler R, Vanhaesebroeck B, Maddocks ODK, Ponimaskin E, Carroll B, Korolchuk VI. mTORC1 activity is supported by spatial association with focal adhesions. J Cell Biol. 2021 May 3;220(5):e202004010. doi: 10.1083/jcb.202004010.
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