Staff Profile
Dr Gordon Strathdee
Lecturer in Genome Instability
- Telephone: 0191 2084397
- Personal Website: https://www.ncl.ac.uk/medical-sciences/research/institutes/biosciences/
- Address: Biosciences Institute
Newcastle University Centre for Cancer
Faculty of Medical Sciences
Paul O’Gorman Building
Newcastle University
Framlington Place
Newcastle upon Tyne
NE2 4HH UK
Research Group Leader - Researching altered DNA methylation in cancer to identify novel therapeutic targets and molecular markers
Deputy Director of Postgraduate Research, Biosciences Institute
Member Newcastle University Centre for Cancer
Member Precision Medicine, Genomics and Informatics research theme
Affiliate Ageing and Geroscience research theme
Member of Institute EDI committee, TCRI
EDI lead, Precision Medicine, Genomics and Informatics research theme
Member of Faculty of Medicine Ethics Committee
Research Interests
The primary interest in my lab is examining the role of a key epigenetic change, altered DNA methylation, in the development, progression and drug sensitivity of leukaemia. This can be split into 3 areas:
Identification of novel, cancer-cell specific, targets – The optimal type of treatment for cancer would be ones that can specifically target cancer cells, while having little or no impact on normal cells and consequently low toxicity for the patient. We are using a novel bioinformatic approach, combining genome wide DNA methylation and gene expression data to identify genes that are required for the survival of cancer cells, but which are not required by normal healthy cells (known as synthetic lethal genes). Targeting the proteins produced by these synthetic lethal genes can then give us a way of specifically killing cancer cells that should have little or no impact on healthy cells. Initially we demonstrated the utility of this approach in childhood leukaemia, but have now expanded the analysis for the identification of synthetic lethal genes across multiple types of solid and haematological cancers.
DNA methylation changes as a cause of long term health effects in cancer survivors – Survival rates for many cancers have improved dramatically and consequently there has been a dramatic increase in the number of cancer survivors in the population. Particularly in survivors of childhood cancer, it is now clear that cancer survivors suffer from a greatly increased risk of many chronic disease and a consequent reduced life expectancy. We are investigating potential mechanism that could underlie these serious late effects that occur many years after cancer treatment have ceased. In particular, we have identified extensive epigenetic changes induced by anti-cancer treatment and are investigating the possibility that these may be key drivers of late health effects in cancer survivors.
Prognostic markers and predictors of drug sensitivity – Leukaemia typically exhibits very large numbers of DNA methylation changes at diagnosis. This gives us a potentially rich source of markers to allow us to predict patient prognosis or response to therapy. We are currently using genome wide DNA methylation data from diagnostic samples and also from samples after exposure to therapy to identify methylation based markers that can predict patient outcome and also to identify genes that are playing a direct role in resistance to chemotherapy
Selected Recent Grants (as PI, within the last 5 years)
2010 – 2013 Tyneside Leukaemia Research Association, Project grant “Defining the opposing roles of HLXB9 in myeloid and lymphoid leukaemia” Gordon Strathdee, Christine Harrison, Value £85,443
2011 – 2012 Dunhill Medical Trust, Project grant “Investigation of the mechanism of DNA methylation instability and its role in age related disease”, Gordon Strathdee, David Oscier, Mays Jawad, John Mathers, Value £74,357
2011 – 2015 Iraqi Ministry of Education, PhD studentship “Identification and verification of methylation markers for the prediction of outcome in acute lymphoblastic leukaemia” Gordon Strathdee(PI), Fadhel Lafta, Value £111,000
2014 - 2018 Bloodwise, Project grant “Clinical exploitation of HOXA4 status for directing treatment in CLL patients Gordon Strathdee(PI), Value £185,239
2014 – 2018 NUORS Fellowship/China Scholarship Council, PhD studentship “The molecular role of MNX1 in control of leukaemia cell growth and survival”, Gordon Strathdee(PI), Fang Ju Value £75,560
2015 – 2017 JGW Patterson Foundation, Project Grant, “Identification of epigenetic regulators of chemosensitivity in chronic lymphocytic leukaemia”. Gordon Strathdee(PI), Elaine Willmore, Value £48,041
2016 – 2017 Newcastle Healthcare Charities, Project Grant, “Investigation of epigenetic damage induced by anti-cancer therapies as a potential mechanism leading to poor long term health outcomes in childhood cancer survivors”. Gordon Strathdee(PI), Linda Sharp, Jill McKay, Value £23,041
2018 – 2021 Kidscan, PhD Fellowship, “Enabling the development of less toxic and more effective cancer therapies through identification of synthetic lethal genes for specific cancer subtypes” Gordon Strathdee(PI), Edward Schwalbe, Lalchung Nungabt, Value £15,000
2019 – 2020 JGW Patterson Foundation, Project Grant, “Investigation of altered DNA methylation, induced by anti-cancer therapies, as a mediating mechanism of serious late health effects in survivors of childhood/young adult cancer” Gordon Strathdee(PI), Linda Sharp, Jill McKay, Value £35,123
Lecturing
Lecturer for BMS2014 Biology of Ageing
Member of steering group for BMS2014 Biology of Ageing
Lecturer for BMS3020 Chronic Disease
Supervision of undergraduate project students in Biomedical Sciences
Postgraduate Supervision
Supervision of PhD students
Supervision of Faculty of Medical Sciences MRes and MSci students
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Artefact
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Articles
- Permtermsin C, Lalchungnunga H, Nakjang S, Casement J, Ogle LF, Reeves HL, Strathdee G, Shukla R. Identification of TIAM1 as a Potential Synthetic-Lethal-like Gene in a Defined Subset of Hepatocellular Carcinoma. International Journal of Molecular Sciences 2023, 24(7), 6387.
- Lalchungnunga H, Hao W, Maris JM, Asgharzadeh S, Henrich K-O, Westermann F, Tweddle DA, Schwalbe EC, Strathdee G. Genome wide DNA methylation analysis identifies novel molecular subgroups and predicts survival in neuroblastoma. British Journal of Cancer 2022, 127, 2006-2015.
- Robinson N, Casement J, Gunter MJ, Huybrechts I, Agudo A, Barranco MR, Eichelmann F, Johnson T, Kaaks R, Pala V, Panico S, Sandanger TM, Schultze MB, Travis RC, Tumino R, Vineis P, Weiderpass E, Skinner R, Sharp L, McKay JA, Strathdee G. Anti-cancer therapy is associated with long-term epigenomic changes in childhood cancer survivors. British Journal of Cancer 2022, 127, 288-300.
- Schwalbe EC, Lalchungnunga H, Lafta F, Barrow TM, Strathdee G. Integration of genome-level data to allow identification of subtype-specific vulnerability genes as novel therapeutic targets. Oncogene 2021, 40(33), 5213-5223.
- Lin W-Y, Fordham SE, Sunter N, Elstob C, Rahman T, Willmore E, Shepherd C, Strathdee G, Mainou-Fowler T, Piddock R, Mearns H, Barrow T, Houlston RS, Marr H, Wallis J, Summerfield G, Marshall S, Pettitt A, Pepper C, Fegan C, Forconi F, Dyer MJS, Jayne S, Sellors A, Schuh A, Robbe P, Oscier D, Bailey J, Rais S, Bentley A, Cawkwell L, Evans P, Hillmen P, Pratt G, Allsup DJ, Allan JM. Genome-wide association study identifies risk loci for progressive chronic lymphocytic leukemia. Nature Communications 2021, 12(1), 665.
- Barrow TM, Nakjang S, Lafta F, Bilotkach K, Woodhouse L, Junge G, Tudhope SJ, Wallis JP, Marr H, Marshall S, Bown N, Willmore E, Strathdee G. Epigenome-wide analysis reveals functional modulators of drug sensitivity and post-treatment survival in chronic lymphocytic leukaemia. British Journal of Cancer 2021, 124, 474-483.
- Barrow TM, Wong Doo N, Milne RL, Giles GG, Willmore E, Strathdee G, Byun HM. Analysis of retrotransposon subfamily DNA methylation reveals novel early epigenetic changes in chronic lymphocytic leukaemia. Haematologica 2021, 106(1), 98-110.
- Timms J, Relton CL, Sharp GC, Rankin J, Strathdee G, McKay JA. Exploring a potential mechanistic role of DNA methylation in the relationship between in utero and post-natal environmental exposures and risk of childhood acute lymphoblastic leukaemia. International Journal of Cancer 2019, 145(11), 2933-2943.
- Potter C, Moorman AV, Relton CL, Ford D, Mathers JC, Strathdee G, McKay JA. Maternal red blood cell folate and infant vitamin B12 status influence methylation of genes associated with childhood acute lymphoblastic leukaemia. Molecular Nutrition & Food Research 2018, 62(22), 1800411C.
- Timms JA, Relton CL, Rankin J, Strathdee G, McKay JA. DNA methylation as a potential mediator of environmental risks in the development of childhood acute lymphoblastic leukaemia. Epigenomics 2016, 8(4), 519-536.
- Gabriel AS, Lafta FM, Schwalbe EC, Nakjang S, Cockell SJ, Iliasova A, Enshaei A, Schwab C, Rand V, Clifford SC, Kinsey SE, Mitchell CD, Vora A, Harrison CJ, Moorman AV, Strathdee G. Epigenetic landscape correlates with genetic subtype but does not predict outcome in childhood acute lymphoblastic leukemia. Epigenetics 2015, 10(8), 717-726.
- van Otterdijk SD, Norden J, Dickinson AM, Pearce MS, Relton CL, Mathers JC, Strathdee G. Aberrations in DNA methylation are detectable during remission of acute lymphoblastic leukemia and predict patient outcome. Epigenomics 2015, 7(1), 35-45.
- Gautrey HE, van Otterdijk SD, Cordell HJ, Mathers JC, Strathdee G, Newcastle 85 Study Core Team. DNA methylation abnormalities at gene promoters are extensive and variable in the elderly and phenocopy cancer cells. FASEB Journal 2014, 28(7), 3261-3272.
- Collerton J, Gautrey HE, van Otterdijk SD, Davies K, Martin-Ruiz C, von Zglinicki T, Kirkwood TBL, Jagger C, Mathers JC, Strathdee G. Acquisition of aberrant DNA methylation is associated with frailty in the very old: findings from the Newcastle 85+Study. Biogerontology 2014, 15(4), 317-328.
- van Otterdijk SD, Mathers JC, Strathdee G. Do age-related changes in DNA methylation play a role in the development of age-related diseases?. Biochemical Society Transactions 2013, 41(3), 803-807.
- Thathia SH, Ferguson S, Gautrey HE, van Otterdijk SD, Hili M, Rand V, Moorman AV, Meyer S, Brown R, Strathdee G. Epigenetic inactivation of TWIST2 in acute lymphoblastic leukemia modulates proliferation, cell survival and chemosensitivity. Haematologica 2012, 97(3), 371-378.
- Ferguson S, Gautrey HE, Strathdee G. The Dual Role of HLXB9 in Leukemia. Pediatric Blood & Cancer 2011, 56(3), 349-352.
- Irving L, Mainou-Fowler T, Parker A, Ibbotson RE, Oscier DG, Strathdee G. Methylation markers identify high risk patients in IGHV mutated chronic lymphocytic leukemia. Epigenetics 2011, 6(3), 300-306.
- Appleton K, Mackay HJ, Judson I, Plumb JA, McCormick C, Strathdee G, Lee C, Barrett S, Reade S, Jadayel D, Tang A, Bellenger K, Mackay L, Setanoians A, Schatzlein A, Twelves C, Kaye SB, Brown R. Phase I and pharmacodynamic trial of the DNA methyltransferase inhibitor decitabine and carboplatin in solid tumors. Journal of Clinical Oncology 2007, 25(29), 4603-4609.
- Strathdee G, Holyoake TL, Sim A, Parker A, Oscier DG, Melo JV, Meyer S, Eden T, Dickinson AM, Mountford JC, Jorgensen HG, Soutar R, Brown R. Inactivation of HOXA genes by hypermethylation in myeloid and lymphoid malignancy is frequent and associated with poor prognosis. Clinical Cancer Research 2007, 13(17), 5048-5055.
- Strathdee, G, Sim, A, Soutar, R, Holyoake, TL, Brown, R. HOXA5 is targeted by cell-type-specific CpG island methylation in normal cells and during the development of acute myeloid leukaemia. Carcinogenesis 2007, 28(2), 299-309.
- Lindsey, J. C., Lusher, M. E., Strathdee, G. R., Brown, R., Gilbertson, R. J., Bailey, S., Ellison, D. W., Clifford, S. C. Epigenetic inactivation of MCJ (DNAJD1) in malignant paediatric brain tumours. International Journal of Cancer 2006, 118(2), 346-352.
- Strathdee G, Davies BR, Vass JK, Siddiqui N, Brown R. Cell type-specific methylation of an intronic CpG island controls expression of the MCJ gene. Carcinogenesis 2004, 25(5), 693-701.
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Book Chapter
- Mathers J, Strathdee G, Relton C. Induction of Epigenetic Alterations by Dietary and Other Environmental Factors. In: Herceg, Z., Ushijima, T, ed. Advances in Genetics: Epigenetics and Cancer, Part B. Amsterdam; London: Academic Press, 2010, pp.4-39.
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Conference Proceedings (inc. Abstract)
- Barrow TM, Woodhouse L, Junge G, Tudhope SJ, Behardien C, Wallis JP, Marr HJ, Marshall SR, Bown N, Willmore E, Strathdee G. The Role of HOXA4 in Chronic Lymphocytic Leukaemia Progression and Response to Therapy. In: American Society of Hematology (ASH) 58th Annual Meeting & Exposition. 2016, San Diego, CA (USA): American Society of Hematology.
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Editorial
- Strathdee G. Methylation markers in the clinical management of leukemia patients – Wave of the future or damp squib?. Epigenomics 2011, 3(4), 391-394.
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Letters
- Strathdee G, Ferguson S, Sim A, Brown R. DNA methylation does not regulate JUNB expression in CML: Comment on "Downregulation of JUNB mRNA expression in advanced phase chronic myelogenous leukemia" by Hoshino et al. [Leuk. Res. 33 (2009) 1361-1366]. Leukemia Research 2010, 34(5), 685-686.
- Strathdee G, Sim A, Parker A, Oscier D, Brown R. Promoter hypermethylation silences expression of the HoxA4 gene and correlates with IgVh mutational status in CLL. Leukemia 2006, 20(7), 1326-1329.
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Review
- Smart C, Strathdee G, Watson S, Murgatroyd C, McAllister-Williams RH. Early life trauma, depression and the glucocorticoid receptor gene - an epigenetic perspective. Psychological Medicine 2015, 45(16), 3393-3410.