Staff Profile
Dr Ken Baker
NIHR Advanced Fellow, Clinical Senior Lecturer and Honorary Consultant Rheumatologist
- Email: kenneth.baker@ncl.ac.uk
- Address: Translational and Clinical Research Institute
Room M4.089, 4rd Floor, William Leech Building
Medical School, Newcastle University
Dr Kenneth F Baker, PhD, MRes, BA(Hons), BMBCh, MRCP(UK), PGCert(Med Ed)
NIHR Advanced Fellow, Clinical Senior Lecturer and Honorary Consultant Rheumatologist
I am a clinical academic rheumatologist working at Newcastle University and The Newcastle upon Tyne Hospitals NHS Foundation Trust. My work combines experimental medicine clinical trials, laboratory immunological phenotyping and qualitative research to better understand and predict flare and drug-free remission in rheumatoid arthritis.
Current Roles
NIHR Advanced Fellow and Clinical Senior Lecturer, Newcastle University
Honorary Consultant Rheumatologist, The Newcastle upon Tyne Hospitals NHS Foundation Trust
Other current responsibilities
1. Chair of Versus Arthritis Research Advisory Committee for Adult Inflammatory Arthritis (2024-present)
2. Member of British Society for Rheumatology Heberden Committee (annual conference scientific organising committee (2022-present)
3. Clinical Academic member of the national JRCPTB Rheumatology Specialist Advisory Committee (2023-present)
Qualifications
2018: PhD ("Predictors of drug-free remission in rheumatoid arthritis", Newcastle University)
2016: PGCertMedEd (Dundee University)
2014: MRes in Translational Medicine and Therapeutics (Newcastle University)
2011: MRCP(UK) (Royal College of Physicians of London)
2008: BM BCh (Oxford University, Merton College)
2005: BA(Hons) Medical Sciences (Oxford University, Merton College)
The work of my research team focuses on rheumatoid arthritis (RA), a common disease affecting 1 in 100 adults where the immune system mistakenly attacks the joints, causing pain, stiffness and swelling. Historically RA was difficult to control for many patients, and joint destruction and disability were commonplace. In contrast, modern treat-to-target regimens of disease-modifying anti-rheumatic drugs (DMARDs) now allow over two-thirds of patients to achieve disease remission by suppressing the immune system. However, these powerful drugs carry potentially severe risks including toxicity and infection, require regular blood tests, and are costly and time-consuming to prescribe and monitor. We and others have shown through clinical trials of DMARD withdrawal that half of patients with RA in remission can reduce or stop DMARDs without a flare of their arthritis. However, it is currently impossible to accurately predict this in the clinic.
My research team aims to:
1. Discover biomarkers of immune phenotype and function to predict flare and drug-free remission, and further develop these towards assays that could be used to guide DMARD tapering in the clinic
2. Characterise the immunological processes underpinning rheumatoid arthritis flare and remission, to identify potential novel ways to treat and prevent arthritis flares
3. Develop new ways to remotely monitor for flare using wearable technology, to help detect flare earlier in patients who are reducing (tapering) their drugs
4. Understand the patient perspective of drug tapering and drug-free remission, to help support shared treatment decisions between patients and their rheumatology team
Current research team members:
Dr Jasmine Sim, Postdoctoral Research Associate
Miss Sofia Sorbet-Santiago, PhD Student
My current and previous research grants to-date (PI and Fellowships) total £2.3m. My active research grants include:
- "Beyond Remission": NIHR Advanced Fellowship, 1.2m (2024-2028). A 4-year fellowship which aims to better understand patient decision-making in drug tapering, detect early warning signals of arthritis flare during drug-tapering using wearable technology, and to understand the feasibility and cost-effectiveness of drug-tapering strategies in routine clinical practice.
- The SustaINed drug-Free remissiON in rheumatoId Arthritis (SINFONIA) study : Foundation for Research in Rheumatology (FOREUM), €600k (2023-2026, Chief Investigator). An international multi-centre study with collaborators in Leiden, Erlangen-Nuremburg and Northumbria universities to identify and validate biomarkers of drug-free remission, to characterise the immune mechanisms underpinning this, and to understand the experience of patients living with rheumatoid arthritis in sustained drug-free remission.
I have supervised 5 PhD students:
- Sofia Sorbet-Santiago (2022-present) - new techniques for automated analysis of flow cytometry data, and using machine learning to predict arthritis flare and drug-free remission
- Nana Aboagye (2023-present) - digital biomarkers of fatigue in chronic disease
- Billy Smith (2023-present) – digital measures of circadian rhythm in epilepsy
- Dr Jasmine Sim (2020-2023) - predicting and understanding drug-free remission in rheumatoid arthritis
- Dr Fiona Rayner (2018-2021) - biological factors that limit sustained remission in rheumatoid arthritis
I have also supervised one MRes student:
Tom Bradley (2024)
I have examined three PhD theses as external examiner:
- Anabelle Nicole Smith (Glasgow University, 2024)
- Luc Francis (King's College London, 2024)
- Hira Noman (Manchester University, 2023)
I have been educational supervisor for two rheumatology clinical trainees, and am a personal tutor for students on the Masters of Clinical Research course at Newcastle University.
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Articles
- Sarvestan J, Baker KF, Silvia Del Din S. Exploring the Effect of Sampling Frequency on Real-World Mobility, Sedentary Behaviour, Physical Activity and Sleep Outcomes Measured with Wearable Devices in Rheumatoid Arthritis: Feasibility, Usability and Practical Considerations. Bioengineering 2025, 12(1), 18.
- MacDonald L, Elmesmari A, Somma D, Frew J, Di Mario C, Madhu R, Paoletti A, Simakou T, Hardy OM, Tolusso B, Campobasso D, Perniola S, Gessi M, Gigante MR, Petricca L, Bruno D, Coletto LA, Benvenuto R, Isaacs JD, Filby A, McDonald D, Sim JPX, Jamieson N, Wei K, D'Agostino MA, Millar NL, Milling S, McSharry C, Gremese E, Affleck K, Baker KF, McInnes IB, Otto TD, Korsunsky I, Alivernini S, Kurowska-Stolarska M. Synovial tissue myeloid dendritic cell subsets exhibit distinct tissue-niche localization and function in health and rheumatoid arthritis. Immunity 2024, 57(12), 2843-2862.e12.
- Baker KF, McDonald D, Hulme G, Hussain R, Coxhead J, Swan D, Schulz AR, Mei HE, MacDonald L, Pratt AG, Filby A, Anderson AE, Isaacs JD. Single-cell insights into immune dysregulation in rheumatoid arthritis flare versus drug-free remission. Nature Communications 2024, 15, 1063.
- Lin CMA, Bennett J, Rajagopala L, Hunter E, Lorenzi AR, Griffiths B, Baker KF. COVID-19 antiviral therapy for non-hospitalised immunosuppressed patients with rheumatic diseases is feasible with positive outcomes. Rheumatology 2023, 62(6), e185-e187.
- Shields AM, Anantharachagan A, Arumugakani G, Baker K, Bahal S, Baxendale H, Bermingham W, Bhole M, Boules E, Bright P, Chopra C, Cliffe L, Cleave B, Dempster J, Devlin L, Dhalla F, Diwakar L, Drewe E, Duncan C, Dziadzio M, Elcombe S, Elkhalifa S, Gennery A, Ghanta H, Goddard S, Grigoriadou S, Hackett S, Hayman G, Herriot R, Herwadkar A, Huissoon A, Jain R, Jolles S, Johnston S, Khan S, Laffan J, Lane P, Leeman L, Lowe DM, Mahabir S, Lochlainn DJM, McDermott E, Misbah S, Moghaddas F, Morsi H, Murng S, Noorani S, O'Brien R, Patel S, Price A, Rahman T, Seneviratne S, Shrimpton A, Stroud C, Thomas M, Townsend K, Vaitla P, Verma N, Williams A, Burns SO, Savic S, Richter AG. Outcomes following SARS-CoV-2 infection in patients with primary and secondary immunodeficiency in the UK. Clinical and Experimental Immunology 2022, 209(3), 247-258.
- Vlachogiannis N, Baker K, Georgiopoulos G, Lazaridis C, Schim van der Loeff I, Hanrath A, Sopova K, Tual-Chalot S, Gatsiou A, Spyridopoulos I, Stamatelopoulos K, Duncan C, Stellos K. Clinical frailty, and not features of acute infection, is associated with late mortality in COVID-19: a retrospective cohort study. Journal of Cachexia, Sarcopenia and Muscle 2022, 13(3), 1502-1513.
- RECOVERY Collaborative Group, Inc. The Newcastle Upon Tyne Hospitals NHS Foundation Trust, Hunter E, De Soyza A, Agbeko R, Baker K, Barr A, Cameron E, Campbell Hewson Q, Duncan C, Emonts M, Fenn A, Francis S, Glover Bengtsson J, Greenhalgh A, Hanrath A, Houghton K, Jerry D, Jones G, Kelly S, Lane N, Macfarlane J, McAlinden P, McCullagh I, McDonald S, Mohammed O, Obukofe R, Parker J, Patience A, Payne B, Price D, Razvi S, Robson S, Sanchez Gonzalez A, Stephenson E, Welton R, West S, Wong E, Yelnoorkar J. Casirivimab and imdevimab in patients admitted to hospital with COVID-19 (RECOVERY): a randomised, controlled, open-label, platform trial. The Lancet 2022, 399(10325), 665-676.
- Stephenson E, Reynolds G, Botting RA, Calero-Nieto FJ, Morgan MD, Tuong ZK, Bach K, Sungnak W, Worlock KB, Yoshida M, Kumasaka N, Kania K, Engelbert J, Olabi B, Spegarova JS, Wilson NK, Mende N, Jardine L, Gardner LCS, Goh I, Horsfall D, McGrath J, Webb S, Mather MW, Lindeboom RGH, Dann E, Huang N, Polanski K, Prigmore E, Gothe F, Scott J, Payne RP, Baker KF, Hanrath AT, Schim van der Loeff ICD, Barr AS, Sanchez-Gonzalez A, Bergamaschi L, Mescia F, Barnes JL, Kilich E, de Wilton A, Saigal A, Saleh A, Janes SM, Smith CM, Gopee N, Wilson C, Coupland P, Coxhead JM, Kiselev VY, van Dongen S, Bacardit J, King HW, Rostron AJ, Simpson AJ, Hambleton S, Laurenti E, Lyons PA, Meyer KB, Nikolic MZ, Duncan CJA, Smith KGC, Teichmann SA, Clatworthy MR, Marioni JC, Göttgens B, Haniffa M. Single-cell multi-omics analysis of the immune response in COVID-19. Nature Medicine 2021, 27, 904-916.
- Hanrath AT, Schim van der Loeff I, Lendrem DW, Baker KF, Price DA, McDowall P, McDowall K, Cook S, Towns P, Schwab U, Evans A, Dixon J, Collins J, Burton-Fanning S, Saunders D, Harwood J, Samuel J, Schmid ML, Pareja-Cebrian L, Hunter E, Murphy E, Taha Y, Payne BAI, Duncan CJA. SARS-CoV-2 Testing of 11,884 Healthcare Workers at an Acute NHS Hospital Trust in England: A Retrospective Analysis. Frontiers in Medicine 2021, 8, 636160.
- Li CKH, Baker K, Jones T, Coulson E, Roberts A, Birrell F. Safety and Tolerability of Subcutaneous Methotrexate in Routine Clinical Practice. Arthritis Care and Research 2021, 73(9), 1306-1311.
- Baker KF, Hanrath AT, Schim van der Loeff I, Kay LJ, Back J, Duncan CJA. National Early Warning Score 2 (NEWS2) to identify inpatient COVID-19 deterioration: a retrospective analysis. Clinical Medicine 2021, 21(2), 84-89.
- Calderon M, Li A, Bazo-Alvarez JC, Dennis J, Baker KF, Schim van der Loeff I, Hanrath AT, Capstick R, Payne BAI, Weiand D, Hunter E, Schwab U. Evaluation of procalcitonin-guided antimicrobial stewardship in patients admitted to hospital with COVID-19 pneumonia. JAC-Antimicrobial Resistance 2021, 3(3).
- Stamatelopoulos K, Georgiopoulos G, Baker KF, Tiseo G, Delialis D, Lazaridis C, Barbieri G, Masi S, Vlachogiannis NI, Sopova K, Mengozzi A, Ghiadoni L, Ajdini B, Ghiadoni L, van der Loeff IS, Vlachopoulos C, Dimopoulos MA, Falcone M, Stellos K, Duncan CJA, Tiseo G, Barbieri G, Masi S, Mengozzi A, Falcone M, Monzani F, Menichetti F, Virdis A, Forfori F, Rubia B, Pietro B, Francesco C, Alessandra DR, Giulia B, Fabio G, Paolo M, Marco M, Chiara P, Naria P, Alessandro C, Carrozzi L, Francesco C, Santini M, Alessandro C, Martina B, Matteo B, Elia N, Stefano S, Francesca R, Giovanna F, Maria S, De Marco S, Rachele A, Valeria C, Simone P, Luciano C, Chiara S, Valentina G, Uliana M, Baker KF, van der Loeff IS, Hanrath AT, Hanrath AT, Duncan CJA, Tee SA, Capstick R, Marchitelli G, Li A, Barr A, Eid A, Ahmed S, Bajwa D, Mohammed O. Estimated pulse wave velocity improves risk stratification for all-cause mortality in patients with COVID-19. Scientific Reports 2021, 11(1), 20239.
- Baker KF, Hanrath AT, Schim van der Loeff I, Tee SA, Capstick R, Marchitelli G, Li A, Barr A, Eid A, Ahmed S, Bajwa D, Mohammed O, Alderson N, Lendrem C, Lendrem DW, COVID Control Group THE, COVID Clinical Group THE, Pareja-Cebrian L, Welch A, Field J, Payne BAI, Taha Y, Price DA, Gibbins C, Schmid ML, Hunter E, Duncan CJA. COVID-19 Management in a UK NHS Foundation Trust with a High Consequence Infectious Diseases Centre: A Retrospective Analysis. Medical Sciences 2021, 9(1), 6.
- Shields AM, Burns SO, Savic S, Richter AG, Anantharachagan A, Arumugakani G, Baker K, Bahal S, Bermingham W, Bhole M, Boules E, Bright P, Burns S, Cleave B, Dempster J, Devlin L, Dhalla F, Drewe E, Duncan C, Dziadzio M, Elkhalifa S, Gennery A, Goddard S, Grigoriadou S, Hayman G, Herwadkar A, Huissoon A, Jain R, Jolles S, Johnston S, Leeman L, Mahabir S, MacLochlainn D, McDermott E, Misbah S, Morsi H, Murng S, Noorani S, O'Brien R, Patel S, Price A, Richter A, Seneviratne S, Shields A, Shrimpton A, Stroud C, Vaitla P, Verma N. COVID-19 in patients with primary and secondary immunodeficiency: The United Kingdom experience. Journal of Allergy and Clinical Immunology 2021, 147(3), 870-875.
- Rayner F, Anderson AE, Baker KF, Buckley CD, Dyke B, Fenton S, Filer A, Goodyear CS, Hilkens CMU, Hiu S, Kerrigan S, Kurowska-Stolarska M, Matthews F, McInnes I, Ng W-F, Pratt AG, Prichard J, Raza K, Siebert S, Stocken D, Teare MD, Young S, Isaacs JD. BIOlogical Factors that Limit sustAined Remission in rhEumatoid arthritis (the BIO-FLARE study): protocol for a non-randomised longitudinal cohort study. BMC Rheumatology 2021, 5, 22.
- Baker KF, Thompson B, Lendrem DW, Scadeng A, Pratt AG, Isaacs JD. Lack of association between clinical and ultrasound measures of disease activity in rheumatoid arthritis remission. Therapeutic Advances in Musculoskeletal Disease 2020, 12.
- Manson JJ, Crooks C, Naja M, Ledlie A, Goulden B, Liddle T, Khan E, Mehta P, Martin-Gutierrez L, Waddington KE, Robinson GA, Ribeiro Santos L, McLoughlin E, Snell A, Adeney C, Schim van der Loeff I, Baker KF, Duncan CJA, Hanrath AT, Lendrem BC, De Soyza A, Peng J, J'Bari H, Greenwood M, Hawkins E, Peckham H, Marks M, Rampling T, Luintel A, Williams B, Brown M, Singer M, West J, Jury EC, Collin M, Tattersall RS. COVID-19-associated hyperinflammation and escalation of patient care: a retrospective longitudinal cohort study. The Lancet Rheumatology 2020, 2(10), e594-e602.
- Baker KF, Skelton AJ, Lendrem DW, Scadeng A, Thompson B, Pratt AG, Isaacs JD. Predicting drug-free remission in rheumatoid arthritis: A prospective interventional cohort study. Journal of Autoimmunity 2019, 105, 102298.
- Baker KF, Isaacs JD, Thompson B. “Living a normal life”: a qualitative study of patients’ views of medication withdrawal in rheumatoid arthritis. BMC Rheumatology 2019, 3, 2.
- Baker KF, Pratt AG, Thompson B, Isaacs JD. Response to: 'Let's stop fooling ourselves. In RA, only ACR/EULAR criteria define remission and equate with absence of disease!' by Boers. Annals of the Rheumatic Diseases 2017, 76(6), e12.
- Baker KF, Jandial S, Thompson B, Walker D, Taylor K, Foster HF. Use of structured musculoskeletal examination routines in undergraduate medical education and postgraduate clinical practice – a UK survey. BMC Medical Education 2016, 16, 227.
- Baker K, Morris J, McCarthy N, Saldana L, Lowther J, Collinson A, Young M. An outbreak of norovirus infection linked to oyster consumption at a UK restaurant, February 2010. Journal of Public Health 2011, 33(2), 205-11.
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Letters
- Hanrath AT, Payne BAI, Duncan CJA. Prior SARS-CoV-2 infection is associated with protection against symptomatic reinfection. Journal of Infection 2021, 82(4), e29-e30.
- Baker KF, Pratt AG, Isaacs JD. Half-Dose vs Stable-Dose Conventional Synthetic Disease-Modifying Antirheumatic Drugs and Disease Flare in Patients with Rheumatoid Arthritis. JAMA - Journal of the American Medical Association 2021, 326(9), 872-873.
- Hunter E, Price DA, Murphy E, Schim van der Loeff I, Baker KF, Lendrem D, Lendrem C, Schmid ML, Pareja-Cebrian L, Welch A, Payne BAI, Duncan CJA. First experience of COVID-19 screening of health-care workers in England. The Lancet 2020, 395(10234), e77-e78.
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Note
- Baker KF, Spierings J, Brom M, Radstake T, Smith E, Weiss R, Burmester G, Bijlsma JWJ, McInnes I, Lories R, Pitzalis C, Distler JHW, Cope AP, Distler O, Hoffmann-Vold AM, Goess CA, Reinke-Breen L, Lauwerys B, Gerlag DM, Singh R, Hegen M, Oliver S, Vesely R. Cure as a treatment target in rheumatoid arthritis and systemic sclerosis—achievable aim or mission impossible? FOREUM stimulates new industry-academia collaboration. Annals of the Rheumatic Diseases 2025, Epub ahead of print.
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Reviews
- Baker KF, Sim JPX, Isaacs JD. Biomarkers of tolerance in immune-mediated inflammatory diseases: a new era in clinical management?. The Lancet Rheumatology 2021, 3(5), e371-e382.
- Baker KF, Isaacs JD. Novel therapies for immune-mediated inflammatory diseases: What can we learn from their use in rheumatoid arthritis, spondyloarthritis, systemic lupus erythematosus, psoriasis, Crohn's disease and ulcerative colitis?. Annals of the Rheumatic Diseases 2018, 77(2), 175-187.
- Baker KF, Isaacs JD. Prospects for therapeutic tolerance in humans. Current Opinion in Rheumatology 2014, 26(2), 219-227.